TY - JOUR
T1 - Yeast Biogeography and the Effects of Species Recognition Approaches
T2 - The Case Study of Widespread Basidiomycetous Species from Birch Forests in Russia
AU - Yurkov, Andrey
AU - Inácio, João
AU - Chernov, Ivan Yu
AU - Fonseca, Álvaro
N1 - PMID: 25527366
WOS:000350241000018
PY - 2015
Y1 - 2015
N2 - Understanding diversity and distribution patterns of fungi, including yeasts, ultimately depends on accuracy of species recognition. However, different approaches to yeast species recognition often result in different entities or operational taxonomic units. We studied the effects of using different yeast species recognition approaches, namely morphological species recognition (MSR) and phylogenetic species recognition (PSR), on the distribution patterns of widespread basidiomycetous yeasts. Hence, we have revised a collection of yeast fungi isolated from spatially remote birch forests in the Moscow Region and Western Siberia with molecular typing and identification tools. PCR fingerprinting and rDNA sequencing analyses of strains of nine species previously identified on the basis of morphological and physiological tests (MSR) yielded 21 phylogenetic species (PSR), including three currently undescribed taxa. The number of distinct phylogenetic species comprised within a single morphospecies ranged from one to seven. A total of ten species were found in both regions, whereas the distribution of 11 yeasts was restricted to a single region only. Both geographical region and type of substrate (plant or soil) influence yeast distribution. Cryptococcus wieringae, C. victoriae, C. magnus, and Leucosporidium scottii were frequently found on plant substrates, whereas C. terricola and C. podzolicus were associated to soil substrates. Occurrence of C.magnus, C.albidus and Sporobolomycesroseus was found to depend on the geographical region. Microsatellite-PCR fingerprinting, MSP-PCR, applied to studying yeast intraspecific variability revealed three different types of distribution: (a) variability that depends on geographical factors (Curvibasidiumcygneicollum, C. podzolicus, C.victoriae), (b) genetic identity irrespectively of the region of isolation (Rhodotorulapinicola, C. terricola), and (c) high degree of genetic variability that did not correlate with region of sampling (C.albidus and C.magnus).
AB - Understanding diversity and distribution patterns of fungi, including yeasts, ultimately depends on accuracy of species recognition. However, different approaches to yeast species recognition often result in different entities or operational taxonomic units. We studied the effects of using different yeast species recognition approaches, namely morphological species recognition (MSR) and phylogenetic species recognition (PSR), on the distribution patterns of widespread basidiomycetous yeasts. Hence, we have revised a collection of yeast fungi isolated from spatially remote birch forests in the Moscow Region and Western Siberia with molecular typing and identification tools. PCR fingerprinting and rDNA sequencing analyses of strains of nine species previously identified on the basis of morphological and physiological tests (MSR) yielded 21 phylogenetic species (PSR), including three currently undescribed taxa. The number of distinct phylogenetic species comprised within a single morphospecies ranged from one to seven. A total of ten species were found in both regions, whereas the distribution of 11 yeasts was restricted to a single region only. Both geographical region and type of substrate (plant or soil) influence yeast distribution. Cryptococcus wieringae, C. victoriae, C. magnus, and Leucosporidium scottii were frequently found on plant substrates, whereas C. terricola and C. podzolicus were associated to soil substrates. Occurrence of C.magnus, C.albidus and Sporobolomycesroseus was found to depend on the geographical region. Microsatellite-PCR fingerprinting, MSP-PCR, applied to studying yeast intraspecific variability revealed three different types of distribution: (a) variability that depends on geographical factors (Curvibasidiumcygneicollum, C. podzolicus, C.victoriae), (b) genetic identity irrespectively of the region of isolation (Rhodotorulapinicola, C. terricola), and (c) high degree of genetic variability that did not correlate with region of sampling (C.albidus and C.magnus).
UR - http://www.scopus.com/inward/record.url?scp=84925489055&partnerID=8YFLogxK
U2 - 10.1007/s00284-014-0755-9
DO - 10.1007/s00284-014-0755-9
M3 - Article
C2 - 25527366
AN - SCOPUS:84925489055
SN - 0343-8651
VL - 70
SP - 587
EP - 601
JO - Current Microbiology
JF - Current Microbiology
IS - 4
ER -