@article{df126c75acbb434f8a18d945aadf48bc,
title = "The minimum information required for a glycomics experiment (MIRAGE) project: Improving the standards for reporting glycan microarray-based data",
abstract = "MIRAGE (Minimum Information Required for A Glycomics Experiment) is an initiative that was created by experts in the fields of glycobiology, glycoanalytics and glycoinformatics to produce guidelines for reporting results from the diverse types of experiments and analyses used in structural and functional studies of glycans in the scientific literature. As a sequel to the guidelines for sample preparation (Struwe et al. 2016, Glycobiology, 26:907-910) and mass spectrometry data (Kolarich et al. 2013, Mol. Cell Proteomics, 12:991-995), here we present the first version of guidelines intended to improve the standards for reporting data from glycan microarray analyses. For each of eight areas in the workflow of a glycan microarray experiment, we provide guidelines for the minimal information that should be provided in reporting results. We hope that the MIRAGE glycan microarray guidelines proposed here will gain broad acceptance by the community, and will facilitate interpretation and reproducibility of the glycan microarray results with implications in comparison of data from different laboratories and eventual deposition of glycan microarray data in international databases.",
keywords = "Glycan microarrays, Glycans, Glycobiology, Glycomics, MIRAGE",
author = "Yan Liu and Ryan McBride and Mark Stoll and Palma, {Maria Angelina de S{\'a}} and Lisete Silva and Sanjay Agravat and Aoki-Kinoshita, {Kiyoko F.} and Campbell, {Matthew P.} and Costello, {Catherine E.} and Anne Dell and Haslam, {Stuart M.} and Karlsson, {Niclas G.} and Khoo, {Kay Hooi} and Daniel Kolarich and Novotny, {Milos V.} and Packer, {Nicolle H.} and Rene Ranzinger and Erdmann Rapp and Rudd, {Pauline M.} and Struwe, {Weston B.} and Michael Tiemeyer and Lance Wells and York, {William S.} and Joseph Zaia and Carsten Kettner and Paulson, {James C.} and Ten Feizi and Smith, {David F.}",
note = "The participation of T.F. and Y.L. is supported by the Wellcome Trust (WT099197 and WT108430). Participation of D.F.S. is supported in part by National Institutes of Health (NIH) grant R34GM116252 and the Emory Comprehensive Glycomics Core (ECGC), subsidized by the Emory University School of Medicine and by the National Center for Advancing Translational Sciences (NIH grant UL1TR000454). Participation of R.R. and W.S.Y. is supported by the National Institute of General Medical Sciences (NIGMS) by funding the National Center for Biomedical Glycomics (NIH grant 8P41GM103490). A.D. and S.M.H. acknowledge funding from the Biotechnology and Biological Sciences Research Council (Grant No. BB/K016164/1). We thank the Beilstein-Institut for funding the MIRAGE initiative.",
year = "2017",
doi = "10.1093/glycob/cww118",
language = "English",
volume = "27",
pages = "280--284",
journal = "Glycobiology",
issn = "0959-6658",
publisher = "Oxford University Press",
number = "4",
}