The effect of pH on Marinobacter hydrocarbonoclasticus denitrification pathway and nitrous oxide reductase

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Abstract

Abstract: Increasing atmospheric concentration of N2O has been a concern, as it is a potent greenhouse gas and promotes ozone layer destruction. In the N-cycle, release of N2O is boosted upon a drop of pH in the environment. Here, Marinobacter hydrocarbonoclasticus was grown in batch mode in the presence of nitrate, to study the effect of pH in the denitrification pathway by gene expression profiling, quantification of nitrate and nitrite, and evaluating the ability of whole cells to reduce NO and N2O. At pH 6.5, accumulation of nitrite in the medium occurs and the cells were unable to reduce N2O. In addition, the biochemical properties of N2O reductase isolated from cells grown at pH 6.5, 7.5 and 8.5 were compared for the first time. The amount of this enzyme at acidic pH was lower than that at pH 7.5 and 8.5, pinpointing to a post-transcriptional regulation, though pH did not affect gene expression of N2O reductase accessory genes. N2O reductase isolated from cells grown at pH 6.5 has its catalytic center mainly as CuZ(4Cu1S), while that from cells grown at pH 7.5 or 8.5 has it as CuZ(4Cu2S). This study evidences that an in vivo secondary level of regulation is required to maintain N2O reductase in an active state. Graphic abstract: [Figure not available: see fulltext.].

Original languageEnglish
Pages (from-to)927-940
Number of pages14
JournalJournal of Biological Inorganic Chemistry
Volume25
Issue number7
DOIs
Publication statusPublished - 1 Oct 2020

Keywords

  • Acidic pH
  • Denitrification
  • Marine bacteria
  • Marinobacter hydrocarbonoclasticus
  • Nitrous oxide reductase
  • “CuZ” center

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