Storage of Biomedical Signals: Comparative Review of Formats and Databases

João Rodrigues; Hugo Gamboa; Vladimir Kublanov; Anton Dolganov

doi:10.1109/SIBIRCON48586.2019.8958222

Storage of Biomedical Signals: Comparative Review of Formats and Databases

João Rodrigues, Hugo Gamboa, Vladimir Kublanov, Anton Dolganov

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Citations (Scopus)

Abstract

Current trends in healthcare digitalization make the task of collecting and storing the data of biomedical signals of the subjects relevant. In this article will be described: (i) the existing standard formats of biomedical data files and their comparison in terms of several technical features; (ii) the public databases where biomedical data is accessible, the type of data stored in these databases, how the data is structured. The comparative analysis revealed that the HDF5 file format has the best properties, including compression, speed and ease of access, and the availability of metadata. The most common datasets available online are related to electrocardiography and electroencephalography studies. The comparative review showed that there is a significant reserve that can be used by novice researchers to evaluate the processing algorithms of biomedical signals.

Original language	English
Title of host publication	SIBIRCON 2019 - International Multi-Conference on Engineering, Computer and Information Sciences, Proceedings
Publisher	Institute of Electrical and Electronics Engineers (IEEE)
Pages	652-656
Number of pages	5
ISBN (Electronic)	9781728144016
DOIs	https://doi.org/10.1109/SIBIRCON48586.2019.8958222
Publication status	Published - Oct 2019
Event	2019 International Multi-Conference on Engineering, Computer and Information Sciences, SIBIRCON 2019 - Novosibirsk, Russian Federation Duration: 21 Oct 2019 → 27 Oct 2019

Conference

Conference	2019 International Multi-Conference on Engineering, Computer and Information Sciences, SIBIRCON 2019
Country/Territory	Russian Federation
City	Novosibirsk
Period	21/10/19 → 27/10/19

Keywords

biomedical signals
databases
formats
review
storage

Access to Document

10.1109/SIBIRCON48586.2019.8958222

Cite this

Rodrigues, J., Gamboa, H., Kublanov, V., & Dolganov, A. (2019). Storage of Biomedical Signals: Comparative Review of Formats and Databases. In SIBIRCON 2019 - International Multi-Conference on Engineering, Computer and Information Sciences, Proceedings (pp. 652-656). Article 8958222 Institute of Electrical and Electronics Engineers (IEEE). https://doi.org/10.1109/SIBIRCON48586.2019.8958222

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Rodrigues, J , Gamboa, H, Kublanov, V & Dolganov, A 2019, Storage of Biomedical Signals: Comparative Review of Formats and Databases. in SIBIRCON 2019 - International Multi-Conference on Engineering, Computer and Information Sciences, Proceedings., 8958222, Institute of Electrical and Electronics Engineers (IEEE), pp. 652-656, 2019 International Multi-Conference on Engineering, Computer and Information Sciences, SIBIRCON 2019, Novosibirsk, Russian Federation, 21/10/19. https://doi.org/10.1109/SIBIRCON48586.2019.8958222

Storage of Biomedical Signals: Comparative Review of Formats and Databases. / Rodrigues, João ; Gamboa, Hugo; Kublanov, Vladimir et al.
SIBIRCON 2019 - International Multi-Conference on Engineering, Computer and Information Sciences, Proceedings. Institute of Electrical and Electronics Engineers (IEEE), 2019. p. 652-656 8958222.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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Storage of Biomedical Signals: Comparative Review of Formats and Databases

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