TY - CHAP
T1 - New “Omics” Approaches as Tools to Explore Mechanistic Nanotoxicology
AU - Ventura, Célia
AU - Torres, Vukosava
AU - Vieira, Luís
AU - Gomes, Bruno
AU - Rodrigues, António Sebastião
AU - Rueff, José
AU - Penque, Deborah
AU - Silva, Maria João
N1 - Funding Information:
This work was funded by FCT/ MCTES, project PTDC/SAU-PUB/32587/2017 and project PTDC/BTM-TEC/28554/2017 through national funds (PIDDAC), ToxOmics (UIDB/00009/2020; UIDP/00009/ 2020) and BioISI—Biosystems & Integrative Sciences Institute, Faculty of Sciences University of Lisbon, Lisbon, Portugal. It is also a result of the GenomePT project (POCI-01-0145-FEDER-022184), supported by COMPETE 2020-Operational Programme for Competitiveness and Internationalisation (POCI), Lisboa Portugal Regional Operational Programme (Lisboa2020), Algarve Portugal Regional Operational Programme (CRESC Algarve2020), under the PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund (ERDF), and by FCT, and the National Mass Spectrometry Network (RNEM)-FCT Infrastructure Program, Portugal.
Publisher Copyright:
© 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2022/5/19
Y1 - 2022/5/19
N2 - In the last years, “omics” approaches have been applied to study the toxicity of nanomaterials (NM) with the aim of obtaining insightful information on their biological effects. One of the most developed “omics” field, transcriptomics, expects to find unique profiles of differentially-expressed genes after exposure to NM that, besides providing evidence of their mechanistic mode of action, may also be used as biomarkers for biomonitoring purposes. Moreover, several NM have been associated with epigenetic alterations, i.e., changes in the regulation of gene expression caused by differential DNA methylation, histone tail modification and microRNA expression. Epigenomics research focusing on DNA methylation is increasingly common and the role of microRNAs is being better understood, either promoting or suppressing biological pathways. Moreover, the proteome is a highly dynamic system that changes constantly in response to a stimulus. Therefore, proteomics can identify changes in protein abundance and/or variability that lead to a better understanding of the underlying mechanisms of action of NM while discovering biomarkers. As to genomics, it is still not well developed in nanotoxicology. Nevertheless, the individual susceptibility to NM mediated by constitutive or acquired genomic variants represents an important component in understanding the variations in the biological response to NM exposure and, consequently, a key factor to evaluate possible adverse effects in exposed individuals. By elucidating the molecular changes that are involved NM toxicity, the new “omics” studies are expected to contribute to exclude or reduce the handling of hazardous NM in the workplace and support the implementation of regulation to protect human health.
AB - In the last years, “omics” approaches have been applied to study the toxicity of nanomaterials (NM) with the aim of obtaining insightful information on their biological effects. One of the most developed “omics” field, transcriptomics, expects to find unique profiles of differentially-expressed genes after exposure to NM that, besides providing evidence of their mechanistic mode of action, may also be used as biomarkers for biomonitoring purposes. Moreover, several NM have been associated with epigenetic alterations, i.e., changes in the regulation of gene expression caused by differential DNA methylation, histone tail modification and microRNA expression. Epigenomics research focusing on DNA methylation is increasingly common and the role of microRNAs is being better understood, either promoting or suppressing biological pathways. Moreover, the proteome is a highly dynamic system that changes constantly in response to a stimulus. Therefore, proteomics can identify changes in protein abundance and/or variability that lead to a better understanding of the underlying mechanisms of action of NM while discovering biomarkers. As to genomics, it is still not well developed in nanotoxicology. Nevertheless, the individual susceptibility to NM mediated by constitutive or acquired genomic variants represents an important component in understanding the variations in the biological response to NM exposure and, consequently, a key factor to evaluate possible adverse effects in exposed individuals. By elucidating the molecular changes that are involved NM toxicity, the new “omics” studies are expected to contribute to exclude or reduce the handling of hazardous NM in the workplace and support the implementation of regulation to protect human health.
KW - Epigenomics
KW - microRNAs
KW - Nanomaterials
KW - Proteomics
KW - Toxicogenomics
KW - Transcriptomics
UR - http://www.scopus.com/inward/record.url?scp=85130766238&partnerID=8YFLogxK
U2 - 10.1007/978-3-030-88071-2_8
DO - 10.1007/978-3-030-88071-2_8
M3 - Chapter
C2 - 35583645
AN - SCOPUS:85130766238
T3 - Advances in Experimental Medicine and Biology
SP - 179
EP - 194
BT - Advances in Experimental Medicine and Biology
PB - Springer
ER -