Metabolic signatures of GS-CHO cell clones associated with butyrate treatment and culture phase transition

Nuno Carinhas, Tiago M. Duarte, Laura C. Barreiro, Manuel José Teixeira Carrondo, Paula Maria Alves, Ana P. Teixeira

Research output: Contribution to journalArticle

46 Citations (Scopus)

Abstract

Chinese hamster ovary (CHO) cells are preferred hosts for the production of recombinant biopharmaceuticals. Efforts to optimize these bioprocesses have largely relied on empirical experience and our knowledge of cellular behavior in culture is incomplete. More recently, comprehensive investigations of metabolic network operation have started to be used to uncover traits associated with optimal growth and recombinant protein production. In this work, we used 1Hnuclear magnetic resonance (1H-NMR) to analyze the supernatants of glutamine-synthetase (GS)-CHO cell clones expressing variable amounts of an IgG4 under control and butyrate-treated conditions. Exometabolomic data revealed accumulation of several metabolic by-products, indicating inefficiencies at different metabolic nodes. These data were contextualized in a detailed network and the cellular fluxomes estimated through metabolic flux analysis. This approach allowed comparing metabolic activity across different clones, growth phases and culture conditions, in particular the efficiency pertaining to carbon lost to glycerol and lactate accumulation and the characteristic nitrogen metabolism involving high asparagine and serine uptake rates. Importantly, this study shows that early butyrate treatment has a marked effect on sustaining high nutrient consumption along culture time, being more pronounced during the stationary phase when extra energy generation and biosynthetic activity is fueled to increase IgG formation. Collectively, the information generated contributes to deepening our understanding of CHO cells metabolism in culture, facilitating future design of improved bioprocesses.
Original languageEnglish
Pages (from-to)3244–3257
JournalBiotechnology and Bioengineering
Volume110
Issue number12
DOIs
Publication statusPublished - 1 Dec 2013

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Clone cells
Glutamate-Ammonia Ligase
Butyrates
Phase Transition
Cricetulus
Cell culture
Metabolism
Ovary
Clone Cells
Immunoglobulin G
Phase transitions
Recombinant proteins
Asparagine
Magnetic resonance
Metabolic Flux Analysis
Glycerol
Recombinant Proteins
Serine
Nutrients
Byproducts

Cite this

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abstract = "Chinese hamster ovary (CHO) cells are preferred hosts for the production of recombinant biopharmaceuticals. Efforts to optimize these bioprocesses have largely relied on empirical experience and our knowledge of cellular behavior in culture is incomplete. More recently, comprehensive investigations of metabolic network operation have started to be used to uncover traits associated with optimal growth and recombinant protein production. In this work, we used 1Hnuclear magnetic resonance (1H-NMR) to analyze the supernatants of glutamine-synthetase (GS)-CHO cell clones expressing variable amounts of an IgG4 under control and butyrate-treated conditions. Exometabolomic data revealed accumulation of several metabolic by-products, indicating inefficiencies at different metabolic nodes. These data were contextualized in a detailed network and the cellular fluxomes estimated through metabolic flux analysis. This approach allowed comparing metabolic activity across different clones, growth phases and culture conditions, in particular the efficiency pertaining to carbon lost to glycerol and lactate accumulation and the characteristic nitrogen metabolism involving high asparagine and serine uptake rates. Importantly, this study shows that early butyrate treatment has a marked effect on sustaining high nutrient consumption along culture time, being more pronounced during the stationary phase when extra energy generation and biosynthetic activity is fueled to increase IgG formation. Collectively, the information generated contributes to deepening our understanding of CHO cells metabolism in culture, facilitating future design of improved bioprocesses.",
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Metabolic signatures of GS-CHO cell clones associated with butyrate treatment and culture phase transition. / Carinhas, Nuno; Duarte, Tiago M.; Barreiro, Laura C.; Carrondo, Manuel José Teixeira; Alves, Paula Maria; Teixeira, Ana P.

In: Biotechnology and Bioengineering, Vol. 110, No. 12, 01.12.2013, p. 3244–3257.

Research output: Contribution to journalArticle

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AU - Carinhas, Nuno

AU - Duarte, Tiago M.

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AU - Carrondo, Manuel José Teixeira

AU - Alves, Paula Maria

AU - Teixeira, Ana P.

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