TY - CHAP
T1 - Current challenges and genomic advances towards the development resilient coffee genotypes to abiotic stresses
AU - dos Santos, Tiago Benedito
AU - da Silva Ferreira, Márcia Flores
AU - Marques, Isabel
AU - Oliveira, Stefanie Cristina
AU - Zaidan, Iasmine Ramos
AU - Oliveira, Marcos Góes
AU - Rodrigues, Weverton Pereira
AU - Ribas, Alessandra Ferreira
AU - Guyot, Romain
AU - Ramalho, José Cochicho
AU - Ribeiro-Barros, Ana I.
AU - Pereira, Luiz Filipe Protasio
AU - Partelli, Fábio Luiz
N1 - Publisher Copyright:
© The Author(s), under exclusive license to Springer Nature Switzerland AG 2022.
PY - 2022/10/31
Y1 - 2022/10/31
N2 - Climate variability and change are among the major drivers of abiotic stresses and the concomitant vulnerability of agricultural production systems. With the advent of systems biology, the analysis of complex crop-environment interactions through integrated high-throughput approaches, such as genomics, transcriptomics, proteomics, metabolomics, lipidomics, and interactomics, is currently the most assertive strategy to unravel plant development, metabolism, and acclimation capabilities, and to implement genomics-assisted breeding programs towards the production of resilient crops. With the sequencing of the coffee reference genome, the last decade has seen a rapid worldwide progress in establishing genomic tools, entering a new era of coffee functional genomics. New genomic tools offer practical toolkits for high-throughput identification of genes and pathways that are key resources for improving the adaptability of coffee crop to the present and future climate change scenarios, using worldwide genetic resources of Coffea spp. In this review, we summarize the available coffee genomic resources and discuss their use in the development of new (hybrid) varieties with greater ability to cope with environmental abiotic constraints. To ensure sustainable coffee production, stress-tolerant varieties will be critical in maintaining the coffee bean yield and quality.
AB - Climate variability and change are among the major drivers of abiotic stresses and the concomitant vulnerability of agricultural production systems. With the advent of systems biology, the analysis of complex crop-environment interactions through integrated high-throughput approaches, such as genomics, transcriptomics, proteomics, metabolomics, lipidomics, and interactomics, is currently the most assertive strategy to unravel plant development, metabolism, and acclimation capabilities, and to implement genomics-assisted breeding programs towards the production of resilient crops. With the sequencing of the coffee reference genome, the last decade has seen a rapid worldwide progress in establishing genomic tools, entering a new era of coffee functional genomics. New genomic tools offer practical toolkits for high-throughput identification of genes and pathways that are key resources for improving the adaptability of coffee crop to the present and future climate change scenarios, using worldwide genetic resources of Coffea spp. In this review, we summarize the available coffee genomic resources and discuss their use in the development of new (hybrid) varieties with greater ability to cope with environmental abiotic constraints. To ensure sustainable coffee production, stress-tolerant varieties will be critical in maintaining the coffee bean yield and quality.
KW - Abiotic stresses
KW - Breeding
KW - Climate changes
KW - Coffee
KW - Crop sustainability
KW - Plant tolerance
UR - http://www.scopus.com/inward/record.url?scp=85154544431&partnerID=8YFLogxK
U2 - 10.1007/978-3-031-05706-9_3
DO - 10.1007/978-3-031-05706-9_3
M3 - Chapter
AN - SCOPUS:85154544431
SN - 978-3-031-05705-2
SP - 41
EP - 69
BT - Genomic Designing for Abiotic Stress Resistant Technical Crops
A2 - Kole, Chittaranjan
PB - Springer
CY - Cham
ER -
