TY - GEN
T1 - Causal Graph Discovery for Explainable Insights on Marine Biotoxin Shellfish Contamination
AU - Ribeiro, Diogo
AU - Ferraz, Filipe
AU - Lopes, Marta B.
AU - Rodrigues, Susana
AU - Costa, Pedro Reis
AU - Vinga, Susana
AU - Carvalho, Alexandra M.
N1 - Funding Information:
This work was supported by national funds through FundaÇão para a Ciência e a Tecnologia (FCT) through projects UIDB/00297/2020 and UIDP/00297/2020 (NOVA Math), UIDB/00667/2020 and UIDP/00667/2020 (UNIDEMI), UIDB/50008/2020 (IT), UIDB/50021/2020 (INESC-ID), and also the project MATISSE (DSAIPA/DS/0026/2019), and CEECINST/00042/2021, PTDC/CCI-BIO/4180/2020, and PTDC/CTM-REF/2679/2020. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 951970 (OLISSIPO project).
Publisher Copyright:
© The Author(s), under exclusive license to Springer Nature Switzerland AG 2023.
PY - 2023/11
Y1 - 2023/11
N2 - Harmful algal blooms are natural phenomena that cause shellfish contamination due to the rapid accumulation of marine biotoxins. To prevent public health risks, the Portuguese Institute of the Ocean and the Atmosphere (IPMA) regularly monitors toxic phytoplankton in shellfish production areas and temporarily closes shellfish production when biotoxins concentration exceeds safety limits. However, this reactive response does not allow shellfish producers to anticipate toxic events and reduce economic losses. Causality techniques applied to multivariate time series data can identify the variables that most influence marine biotoxin contamination and, based on these causal relationships, can help forecast shellfish contamination, providing a proactive approach to mitigate economic losses. This study used causality discovery algorithms to analyze biotoxin concentration in mussels Mytilus galloprovincialis and environmental data from IPMA and Copernicus Marine Environment Monitoring Service. We concluded that the toxins that cause diarrhetic and paralytic shellfish poisoning had more predictors than the toxins that cause amnesic poisoning. Moreover, maximum atmospheric temperature, DSP toxins-producing phytoplankton and wind intensity showed causal relationships with toxicity in mussels with shorter lags, while chlorophyll a (chl-a), mean sea surface temperature and rainfall showed causal associations over longer periods. Causal relationships were also found between toxins in nearby production areas, indicating a spread of biotoxins contamination. This study proposes a novel approach to infer the relationships between environmental variables to enhance decision-making and public health safety regarding shellfish consumption in Portugal.
AB - Harmful algal blooms are natural phenomena that cause shellfish contamination due to the rapid accumulation of marine biotoxins. To prevent public health risks, the Portuguese Institute of the Ocean and the Atmosphere (IPMA) regularly monitors toxic phytoplankton in shellfish production areas and temporarily closes shellfish production when biotoxins concentration exceeds safety limits. However, this reactive response does not allow shellfish producers to anticipate toxic events and reduce economic losses. Causality techniques applied to multivariate time series data can identify the variables that most influence marine biotoxin contamination and, based on these causal relationships, can help forecast shellfish contamination, providing a proactive approach to mitigate economic losses. This study used causality discovery algorithms to analyze biotoxin concentration in mussels Mytilus galloprovincialis and environmental data from IPMA and Copernicus Marine Environment Monitoring Service. We concluded that the toxins that cause diarrhetic and paralytic shellfish poisoning had more predictors than the toxins that cause amnesic poisoning. Moreover, maximum atmospheric temperature, DSP toxins-producing phytoplankton and wind intensity showed causal relationships with toxicity in mussels with shorter lags, while chlorophyll a (chl-a), mean sea surface temperature and rainfall showed causal associations over longer periods. Causal relationships were also found between toxins in nearby production areas, indicating a spread of biotoxins contamination. This study proposes a novel approach to infer the relationships between environmental variables to enhance decision-making and public health safety regarding shellfish consumption in Portugal.
KW - Biotoxins
KW - Causal Discovery
KW - Mussels Contamination
UR - http://www.scopus.com/inward/record.url?scp=85177819895&partnerID=8YFLogxK
U2 - 10.1007/978-3-031-48232-8_44
DO - 10.1007/978-3-031-48232-8_44
M3 - Conference contribution
AN - SCOPUS:85177819895
SN - 978-3-031-48231-1
T3 - Lecture Notes in Computer Science
SP - 483
EP - 494
BT - Intelligent Data Engineering and Automated Learning – IDEAL 2023
A2 - Quaresma, Paulo
A2 - Camacho, David
A2 - Yin, Hujun
A2 - Gonçalves, Teresa
A2 - Julian, Vicente
A2 - Tallón-Ballesteros, Antonio J.
PB - Springer
CY - Cham
T2 - 24th International Conference on Intelligent Data Engineering and Automated Learning, IDEAL 2023
Y2 - 22 November 2023 through 24 November 2023
ER -