TY - JOUR
T1 - An allosteric redox switch involved in oxygen protection in a CO2 reductase
AU - Oliveira, Ana Rita
AU - Mota, Cristiano
AU - Vilela-Alves, Guilherme
AU - Manuel, Rita Rebelo
AU - Pedrosa, Neide
AU - Fourmond, Vincent
AU - Klymanska, Kateryna
AU - Léger, Christophe
AU - Guigliarelli, Bruno
AU - Romão, Maria João
AU - Cardoso Pereira, Inês A.
N1 - Funding Information:
This work was financially supported by Fundação para a Ciência e Tecnologia (FCT, Portugal) through fellowship nos. SFRH/BD/116515/2016 (A.R.O.), DFA/BD/7897/2020 (R.R.M.) and COVID/BD/151766/2021 (A.R.O.), grant no. PTDC/BII-BBF/2050/2020 (I.A.C.P. and M.J.R.) and R&D units MOSTMICRO-ITQB (grant nos. UIDB/04612/2020 and UIDP/04612/2020) (I.A.C.P.) and UCIBIO (grant nos. UIDP/04378/2020 and UIDB/04378/2020) (M.J.R.), and Associated Laboratories LS4FUTURE (grant no. LA/P/0087/2020) (I.A.C.P.) and i4HB (grant no. LA/P/0140/2020) (M.J.R.). The European Union’s Horizon 2020 research and innovation program (grant no. 810856) is also acknowledged (I.A.C.P.). This work was also funded by the French national research agency (ANR – MOLYERE project, grant no. 16-CE-29-0010-01) (B.G.), and supported by the computing facilities of the Centre Régional de Compétences en Modélisation Moléculaire de Marseille. We thank the excellent technical assistance of João Carita from ITQB NOVA on microbial cell growth. We are also grateful to the EPR-MRS facilities of the Aix-Marseille University EPR centre and acknowledge the support of the European research infrastructure MOSBRI (grant no. 101004806) (B.G.) and the French research infrastructure INFRANALYTICS (FR2054) (B.G.). We also acknowledge the ESRF and ALBA Synchrotron for provision of synchrotron radiation facilities, and we thank the staff of the ESRF and EMBL Grenoble and ALBA for assistance and support in using beamlines ID23-1, ID30A-3, ID30B and XALOC.
Funding Information:
This work was financially supported by Fundação para a Ciência e Tecnologia (FCT, Portugal) through fellowship nos. SFRH/BD/116515/2016 (A.R.O.), DFA/BD/7897/2020 (R.R.M.) and COVID/BD/151766/2021 (A.R.O.), grant no. PTDC/BII-BBF/2050/2020 (I.A.C.P. and M.J.R.) and R&D units MOSTMICRO-ITQB (grant nos. UIDB/04612/2020 and UIDP/04612/2020) (I.A.C.P.) and UCIBIO (grant nos. UIDP/04378/2020 and UIDB/04378/2020) (M.J.R.), and Associated Laboratories LS4FUTURE (grant no. LA/P/0087/2020) (I.A.C.P.) and i4HB (grant no. LA/P/0140/2020) (M.J.R.). The European Union’s Horizon 2020 research and innovation program (grant no. 810856) is also acknowledged (I.A.C.P.). This work was also funded by the French national research agency (ANR – MOLYERE project, grant no. 16-CE-29-0010-01) (B.G.), and supported by the computing facilities of the Centre Régional de Compétences en Modélisation Moléculaire de Marseille. We thank the excellent technical assistance of João Carita from ITQB NOVA on microbial cell growth. We are also grateful to the EPR-MRS facilities of the Aix-Marseille University EPR centre and acknowledge the support of the European research infrastructure MOSBRI (grant no. 101004806) (B.G.) and the French research infrastructure INFRANALYTICS (FR2054) (B.G.). We also acknowledge the ESRF and ALBA Synchrotron for provision of synchrotron radiation facilities, and we thank the staff of the ESRF and EMBL Grenoble and ALBA for assistance and support in using beamlines ID23-1, ID30A-3, ID30B and XALOC.
Publisher Copyright:
© 2023, The Author(s), under exclusive licence to Springer Nature America, Inc.
PY - 2023/11/20
Y1 - 2023/11/20
N2 - Metal-dependent formate dehydrogenases reduce CO2 with high efficiency and selectivity, but are usually very oxygen sensitive. An exception is Desulfovibrio vulgaris W/Sec-FdhAB, which can be handled aerobically, but the basis for this oxygen tolerance was unknown. Here we show that FdhAB activity is controlled by a redox switch based on an allosteric disulfide bond. When this bond is closed, the enzyme is in an oxygen-tolerant resting state presenting almost no catalytic activity and very low formate affinity. Opening this bond triggers large conformational changes that propagate to the active site, resulting in high activity and high formate affinity, but also higher oxygen sensitivity. We present the structure of activated FdhAB and show that activity loss is associated with partial loss of the metal sulfido ligand. The redox switch mechanism is reversible in vivo and prevents enzyme reduction by physiological formate levels, conferring a fitness advantage during O2 exposure. [Figure not available: see fulltext.].
AB - Metal-dependent formate dehydrogenases reduce CO2 with high efficiency and selectivity, but are usually very oxygen sensitive. An exception is Desulfovibrio vulgaris W/Sec-FdhAB, which can be handled aerobically, but the basis for this oxygen tolerance was unknown. Here we show that FdhAB activity is controlled by a redox switch based on an allosteric disulfide bond. When this bond is closed, the enzyme is in an oxygen-tolerant resting state presenting almost no catalytic activity and very low formate affinity. Opening this bond triggers large conformational changes that propagate to the active site, resulting in high activity and high formate affinity, but also higher oxygen sensitivity. We present the structure of activated FdhAB and show that activity loss is associated with partial loss of the metal sulfido ligand. The redox switch mechanism is reversible in vivo and prevents enzyme reduction by physiological formate levels, conferring a fitness advantage during O2 exposure. [Figure not available: see fulltext.].
UR - http://www.scopus.com/inward/record.url?scp=85177036292&partnerID=8YFLogxK
U2 - 10.1038/s41589-023-01484-2
DO - 10.1038/s41589-023-01484-2
M3 - Article
C2 - 37985883
AN - SCOPUS:85177036292
SN - 1552-4450
VL - 20
SP - 111
EP - 119
JO - Nature Chemical Biology
JF - Nature Chemical Biology
IS - 1
ER -