TY - GEN
T1 - Alternative Serum Biomarkers of Bacteraemia for Intensive Care Unit Patients
AU - Araújo, Rúben
AU - Ramalhete, Luís
AU - Fonseca, Tiago
AU - Von Rekowski, Cristiana
AU - Bento, Luís
AU - Calado, Cecília R.C.
N1 - Funding Information:
This work was supported by the project grant DSAIPA/DS/0117/2020 supported by Fundação para a Ciência e a Tecnologia, Portugal and by the project grant NeproMD/ISEL/2020 financed by Instituto Politécnico de Lisboa.
Publisher Copyright:
© 2023 IEEE.
PY - 2023
Y1 - 2023
N2 - The diagnosis of infections in hospital or clinical settings usually involves a series of time-consuming steps, including biological sample collection, culture growth of the organism isolation and subsequent characterization. For this, there are diverse infection biomarkers based on blood analysis, however, these are of limited use in patients presenting confound processes as inflammatory process as occurring at intensive care units. In this preliminary study, the application of serum analysis by FTIR spectroscopy, to predict bacteraemia in 102 critically ill patients in an ICU was evaluated. It was analysed the effect of spectra pre-processing methods and spectral sub-regions on t-distributed stochastic neighbour embedding. By optimizing Support Vector Machine (SVM) models, based on normalised second derivative spectra of a smaller subregion, it was possible to achieve a good bacteraemia predictive model with a sensitivity and specificity of 76%. Since FTIR spectra of serum is acquired in a simple, economic and rapid mode, the technique presents the potential to be a cost-effective methodology of bacteraemia identification, with special relevance in critically ill patients, where a rapid infection diagnostic will allow to avoid the unnecessary use of antibiotics, which ultimately will ease the load on already fragile patients' metabolism.
AB - The diagnosis of infections in hospital or clinical settings usually involves a series of time-consuming steps, including biological sample collection, culture growth of the organism isolation and subsequent characterization. For this, there are diverse infection biomarkers based on blood analysis, however, these are of limited use in patients presenting confound processes as inflammatory process as occurring at intensive care units. In this preliminary study, the application of serum analysis by FTIR spectroscopy, to predict bacteraemia in 102 critically ill patients in an ICU was evaluated. It was analysed the effect of spectra pre-processing methods and spectral sub-regions on t-distributed stochastic neighbour embedding. By optimizing Support Vector Machine (SVM) models, based on normalised second derivative spectra of a smaller subregion, it was possible to achieve a good bacteraemia predictive model with a sensitivity and specificity of 76%. Since FTIR spectra of serum is acquired in a simple, economic and rapid mode, the technique presents the potential to be a cost-effective methodology of bacteraemia identification, with special relevance in critically ill patients, where a rapid infection diagnostic will allow to avoid the unnecessary use of antibiotics, which ultimately will ease the load on already fragile patients' metabolism.
KW - Biomarkers
KW - FTIR spectroscopy
KW - Infection
KW - Intensive Care Unit
UR - http://www.scopus.com/inward/record.url?scp=85166484926&partnerID=8YFLogxK
U2 - 10.1109/ENBENG58165.2023.10175340
DO - 10.1109/ENBENG58165.2023.10175340
M3 - Conference contribution
AN - SCOPUS:85166484926
T3 - 2023 IEEE 7th Portuguese Meeting on Bioengineering, ENBENG 2023
SP - 21
EP - 24
BT - 2023 IEEE 7th Portuguese Meeting on Bioengineering, ENBENG 2023
PB - Institute of Electrical and Electronics Engineers (IEEE)
T2 - 7th IEEE Portuguese Meeting on Bioengineering, ENBENG 2023
Y2 - 22 June 2023 through 23 June 2023
ER -