Research output per year
Research output per year
Research activity per year
Sofia G. Seabra completed a PhD in Biology (Evolutionary Biology) from the Faculty of Sciences, University of Lisbon (FCUL) in 2007. Since April 2020 she has an institutional CEEC contract (https://doi.org/10.54499/CEECINST/00102/2018/CP1567/CT0040) as Assistant Researcher at the Global Public Health Teaching and Research Unit of Institute of Hygiene and Tropical Medicine at NOVA University of Lisbon (IHMT-NOVA). She was Principal Investigator in the internally GHTM funded project 'WasteWaterVir - Integrating metavirome analysis of wastewaters into tools for surveillance of infectious diseases' and is a team member in the ongoing We'Search program (FCG/La Caixa) funded project "Airway colonization and microbiome in relation to asthma and atopy in children from Cabo Verde- RESPIRA-CV", in the ongoing FCT project "Minimizing the emergence and dissemination of HIV-1 drug resistance in PALOPs through an evidence-based portable high-throughput sequencing and computational approach" and on the Horizon European Project "EuCARE: European Cohorts of Patients and Schools to Advance Response to Epidemics". She supervised several post-graduate students and participated in evaluation committees in PhD and Master theses. She teaches Biostatistics in the IHMT Doctoral Programs 'International Health', Molecular Epidemiology in the NOVA Masters 'Computational Biology and Bioinformatics'. She organizes and teaches short courses related to bioinformatics: “Crash course: Using the command line” and “Python Applied to the Biomedical Sciences”. She is a member of the IHMT-NOVA Council since December 2022, a member of the Scientific Committee of the Doctoral Program on International Health since 2022 and of the Scientific Committe of the biobank Biotropical Resources (BIOTROP) of GHTM-IHMT-NOVA since 2024.
I apply my background on genomics and bioinformatics to research on public health issues:
- Viral detection and sequencing from wastewater samples to contribute to the wastewater-based surveillance of emerging diseases.
- Microbiome genetic characterization to understand patterns of diversity and differentiation of: insect vectors’ gut microbiome; human respiratory microbiome.
- Zika virus’ genome-wide diversity and phylodynamics, to identify genomic footprints of differentiation patterns and to propose a dynamic classification system that reflects its divergence levels.
I also contribute to data management and statistical data analysis in several projects:
- SARS-CoV2 serological screening in a large-scale municipal survey in Cascais, Lisbon Metropolitan area.
- Pilot phase of the POLEN Research data Repository (FCT-FCCN).
Biology (Evolutionary Biology), Doctorate, Patterns of divergence in populations of two Mediterranean species of genus Cicada L. (Hemiptera, Cicadidae) based on microsatellites genetic markers and acoustic data, Universidade de Lisboa
Award Date: 22 Jun 2007
Research output: Contribution to journal › Article › peer-review
Research output: Contribution to journal › Article › peer-review
Research output: Contribution to conference › Poster
Research output: Contribution to journal › Article › peer-review
Research output: Contribution to journal › Meeting Abstract › peer-review
Sofia Gonçalves Seabra (Speaker)
Activity: Talk or presentation › Oral presentation