Research output

Research output per year 1996 2010 2012 2013 2014 2015 2016 2019 2021

• 615 Citations
• 13 h-Index
• 69 Conference contribution
• 34 Article
• 11 Other contribution
• 7 Chapter
• 10 More
  • 3 Other
  • 3 Paper
  • 1 Book
  • 1 Other chapter contribution
  • 1 Abstract
  • 1 Conference article

Research output per year

Research output per year

Search results

• 2015

  Diffusional kurtosis imaging using a fast heuristic constrained linear least squares algorithm: A plugin for OsiriX

  Mesquita, N., Santinha, J. & Fonseca, J., 2015, Proceedings - 2015 IEEE 4th Portuguese Meeting on Bioengineering, ENBENG 2015. Leite-Moreira, A., Tavares, J. M. R. S., Martins, P. A. L. S., Natal Jorge, R. M., Parente, M. P. L. & Belinha, J. (eds.). New York: Institute of Electrical and Electronics Engineers Inc., 7088874

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Imaging techniques 100%
  • Diffusion 80%
  • Medical image processing 35%
  • Picture archiving and communication systems 34%
  • Medical imaging 29%

• Distributed controllers modeling through Petri nets with multi-asynchronous-channels

  Moutinho, F., Fonseca, J. M. M. R. D. & Gomes, L., 2015, 2015 IEEE International Conference on Industrial Technology (ICIT). New York: Institute of Electrical and Electronics Engineers Inc., Vol. 2015-June. p. 1564-1569 6 p. 7125319

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Petri nets 100%
  • Controllers 54%
  • System program documentation 51%
  • Telecommunication networks 29%
  • Specifications 21%

• Evolutionary analysis of online labs

  Cordeiro, R., Fonseca, J. M. & Alves, G. R., 2015, p. 631-637.

  Research output: Contribution to conference › Other › peer-review

• Extending input-output place-transition Petri nets for distributed controller systems development

  Gomes, L., Moutinho, F., Pereira, F., Fonseca, J. M. M. R. D., Costa, A. & Barros, J. P., 31 Aug 2015, Proceedings - 2014 International Conference on Mechatronics and Control (ICMC 2014). New York: Institute of Electrical and Electronics Engineers Inc., p. 1099-1104 6 p. 7231723

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Petri nets 100%
  • Controllers 54%
  • Markup languages 26%
  • Automation 15%
  • Semantics 13%
  16 Citations (Scopus)

• Soft skills for science and technology students: A pedagogical experience

  Costa, R. A., Fonseca, J. M., Kullberg, J. C., Martins, N. C. & Santana, F., 4 Nov 2015, Proceedings of 2015 International Conference on Interactive Collaborative Learning, ICL 2015. Institute of Electrical and Electronics Engineers Inc., p. 1198-1202 5 p. 7318206

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Students 100%
  • employability 47%
  • Curricula 47%
  • syllabus 46%
  • experience 42%
  3 Citations (Scopus)

• Voice pathologies identification speech signals, features and classifiers evaluation

  Cordeiro, H., Fonseca, J., Guimaraes, I. & Meneses, C., 2015, p. 81-86. 6 p.

  Research output: Contribution to conference › Other › peer-review

  • Pathology 100%
  • Classifiers 62%
  • Acoustics 20%
  • Speech processing 15%
  • Identification (control systems) 11%
  12 Citations (Scopus)

• ‘miSimBa’ — A simulator of synthetic time-lapsed microscopy images of bacterial cells

  Martins, L., Fonseca, J. & Ribeiro, A., Feb 2015, p. 1-6. 6 p.

  Research output: Contribution to conference › Other › peer-review

  Open Access

  • Escherichia coli 100%
  • Microscopic examination 84%
  • Simulators 57%
  • Cell growth 55%
  • Image acquisition 45%
  5 Citations (Scopus)
• 2014

  CTCT – Competências Transversais em Ciências e Tecnologias: Uma experiência na FCT/UNL

  Fonseca, J. M. M. R. D., 1 Jan 2014

  Research output: Other contribution

• FIF: A fuzzy information fusion algorithm based on multi-criteria decision making

  Ribeiro, M. R. S. D. A., Mora, A. T. B. D. & Fonseca, J. M. M. R. D., Mar 2014, In: Knowledge-Based Systems. 58, NA, p. 23-32

  Research output: Contribution to journal › Article › peer-review

  • Information Fusion 100%
  • Information fusion 79%
  • Multicriteria Decision-making 66%
  • Decision making 49%
  • Computational Intelligence 48%
  47 Citations (Scopus)

• Generator of Synthetic Time-Lapsed, Phase-Contrast Microscopy Images of Growing E. Coli Cell Populations

  Fonseca, J. M. M. R. D., 2014

  Research output: Other contribution

• Image Alignment and Lineage Construction Tool to Study Segregation and Partitioning in Division of Unwanted Protein Aggregates in Escherichia Coli

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2014

  Research output: Other contribution

• In Vivo Retention of Protein Aggregates in Escherichia Coli

  Fonseca, J. M. M. R. D., 1 Jan 2014, The 11th International Workshop on Computational Systems Biology (WCSB). Vol. 1. p. 34

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Metodologia para a deteção de artefactos luminosos em imagens de retinografia com aplicação em rastreio oftalmológico

  Translated title of the contribution: Methodology for image artifacts detection in retinal images with application in ophthalmology screeningMora, A. T. B. D. & Fonseca, J. M. M. R. D., Jun 2014, In: RISTI : Revista Ibérica de Sistemas e Tecnologias de Informação. 13, 1, p. 51-63

  Research output: Contribution to journal › Article › peer-review

  • Ophthalmology 100%
  • Screening 60%

• On the Importance of an Automated and Modular Solar Image Processing Tool

  Fonseca, J. M. M. R. D. & Ribeiro, M. R. S. D. A., 1 Jan 2014

  Research output: Other contribution

• Photometry of sunspots depending on changes in the magnetic field

  Lorenc, M., Dorotovič, I., Barandas, M. D. S. G. & Fonseca, J. M., 26 May 2014.

  Research output: Contribution to conference › Paper › peer-review

• Proceedings of the 11th International Workshop on Computational Systems Biology, WCSB 2014

  Fonseca, J. M. M. R. D., 1 Jan 2014, Tampere, Finland: Tampere International Center for Signal Processing. (TICSP series; no. 64)

  Research output: Book/Report › Book

• Reinke's Edema and Nodules Identification in Vowels Using Spectral Features and Pitch Jitter

  Cordeiro, H. T., Fonseca, J. M. M. R. D. & Ribeiro, C. M., 2014, CONFERENCE ON ELECTRONICS, TELECOMMUNICATIONS AND COMPUTERS - CETC 2013. Fantoni, A. & Ferreira, A. J. (eds.). Amsterdam: ELSEVIER SCIENCE BV, p. 202–208 (Procedia Technology; vol. 17).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Pathology 100%
  • Jitter 89%
  • Speech processing 36%
  • Identification (control systems) 25%
  • Support vector machines 23%

• Selection, calibration and mosaicing of AMIE images to build a Moon Atlas as seen by SMART-1

  Fonseca, J. M. M. R. D. & Mora, A. T. B. D., 1 Jan 2014

  Research output: Other contribution

• Spectral envelope and periodic component in classification trees for pathological voice diagnostic

  Cordeiro, H., Fonseca, J. & Meneses, C., 2 Nov 2014, 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014. Institute of Electrical and Electronics Engineers Inc., p. 4607-4610 4 p. 6944650

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Decision Trees 100%
  • Decision trees 77%
  • Vocal Cords 46%
  • Pathology 45%
  • Classifiers 28%
  10 Citations (Scopus)

• Structural Deformation Measurements by Image Block Matching Algorithms

  Fonseca, J. M. M. R. D., 2014

  Research output: Other contribution

• Sunspots and Coronal Bright Points Tracking using a Hybrid Algorithm of PSO and Active Contour Model

  Dorotovič, I., Shahamatnia, E., Lorenc, M., Rybanský, M., Ribeiro, R. A. & Fonseca, J. M., 2014, In: Sun and Geosphere. 9, 1, p. 81-84

  Research output: Contribution to journal › Article › peer-review

  • sunspots 100%
  • optimization 55%
  • space weather 46%
  • solar atmosphere 42%
  • solar activity 39%

• Towards a SMART-1 Atlas of the Moon

  Fonseca, J. M. M. R. D. & Mora, A. T. B. D., 1 Jan 2014

  Research output: Other contribution

  • atlas 100%
  • Moon 91%
  • pixel 53%
  • Southern Hemisphere 26%
  • spacecraft 24%

• Upper Body Joint Angle Measurements for Physical Rehabilitation Using Visual Feedback

  Barandas, M., Gamboa, H. F. S. & Fonseca, J. M. M. R. D., 2014, Physiological Computing Systems: First International Conference, PhyCS 2014, Lisbon, Portugal, January 7-9, 2014, Revised Selected Papers. Silva, H. P. D., Holzinger, A., Fairclough, S. & Majoe, D. (eds.). Berlin Heidelberg: Springer-Verlag, p. 91-104 (Lecture Notes in Computer Science; vol. 8908).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Angle measurement 100%
  • Patient rehabilitation 77%
  • Feedback 51%
  • Biofeedback 47%
  • Motion analysis 19%
• 2013

  A Network and Repository for Online Laboratory, based on Ontology

  Fonseca, J. M. M. R. D., 1 Jan 2013, IEEE Global Engineering Education Conference. p. 1177-1189

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access
  2 Citations (Scopus)

• A PSO/Snake Hybrid Algorithm for Determining Differential Rotation of Coronal Bright Points

  Fonseca, J. M. M. R. D., Ribeiro, M. R. S. D. A. & DEE Group Author, 1 Jan 2013, Proceedings of the 5th International Joint Conference on Computational Intelligence (IJCCI 2013). p. 56-63

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• A template matching technique for artifacts detection in retinal images

  Fonseca, J. M. M. R. D. & Mora, A. T. B. D., 1 Jan 2013, International Symposium on Image and Signal Processing and Analysis (ISPA 2013). p. 717-722

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access
  7 Citations (Scopus)

• A Three-Phase Microgenerator Based Solution for Power Harvesting Applications

  Fonseca, J. M. M. R. D., 1 Jan 2013, In: Renewable Energy & Power Quality Journal. 9, NA, p. 1-5

  Research output: Contribution to journal › Article › peer-review

• CellAging: a tool to study segregation and partitioning in division in cell lineages of Escherichia coli

  Häkkinen, A., Muthukrishnan, A. B., Mora, A. T. B. D., Fonseca, J. M. M. R. D. & Ribeiro, M. R. S. D. A., 1 Jan 2013, In: Bioinformatics. 29, 13, p. 1708-1709

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Cell Lineage 100%
  • Escherichia coli 66%
  • Protein Aggregates 60%
  • Fluorescence Microscopy 23%
  • Cell Division 22%
  31 Citations (Scopus)

• Edema and Nodulos Identification in vowels using spectral features and jitter

  Fonseca, J. M. M. R. D., 1 Jan 2013, Book of Abstracts of CETC'2013. p. -

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Lisling 3D: A Serious Game for theTreatment of Portuguese Aphasic Patients

  Fonseca, J. M. M. R. D. & Rybarczyk, Y. P., 1 Jan 2013, Assistive Technology Research Series (IOS Press). p. 585-591

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• LPC Spectrum First Peak Analysis for Voice Pathology Detection

  Fonseca, J. M. M. R. D., 2013, Proceedings of HCist'2013. Vol. 9. p. -

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Pathology 100%
  • Speech processing 27%
  • Bandwidth 13%

• LPC Spectrum First Peak Analysis for Voice Pathology Detection

  Fonseca, J. M. M. R. D., 2013, In: Procedia Technology. 9, NA, p. 1104-1111 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pathology 100%
  • Speech processing 27%
  • Bandwidth 13%

• Real-time Image Recovery Using Temporal Image Fusion

  Fonseca, J. M. M. R. D., Ribeiro, M. R. S. D. A. & Mora, A. T. B. D., 1 Jan 2013, IEEE International Conference on Fuzzy Systems. p. 1-5

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access

  • Image fusion 100%
  • Recovery 57%
  • Computer vision 36%
  • Pixels 32%
  • Defects 29%
  2 Citations (Scopus)

• Segmentation of Microcopy Images Using Gradient Path Labeling and Artificial Intelligence Techniques

  Fonseca, J. M. M. R. D., 1 Jan 2013, TICSP series. p. 7

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
• 2012

  Block Matching Algorithms for Load tests Evaluation

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, Proceedings of The Eighth International Conference on Engineering Computational Technology. p. 1

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access

• Calibration and Mosaicing of SMART-1 Images

  Fonseca, J. M. M. R. D., Mora, A. T. B. D. & DEE Group Author, 1 Jan 2012

  Research output: Other contribution

• Displacement measurements with block motion algorithms

  Almeida, G., Fonseca, J. & Melício, F., 13 Feb 2012, Computational Vision and Medical Image Processing, Proceedings of VipIMAGE 2011 - 3rd ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing. p. 155-159 5 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Displacement measurement 100%
  • Image processing 59%
  • Civil engineering 39%
  • Transducers 36%
  • Cameras 26%
  1 Citation (Scopus)

• Dynamics of transcription of closely spaced promoters in Escherichia coli, one event at a time

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, In: Journal Of Theoretical Biology. 301, NA, p. 83-94

  Research output: Contribution to journal › Article › peer-review

  Open Access
  4 Citations (Scopus)

• Euronet lab a cloud based laboratory environment

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, COLLABORATIVE LEARNING & NEW PEDAGOGIC APPROACHES IN ENGINEERING EDUCATION. p. 1-9

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access
  5 Citations (Scopus)

• Monitoring of Drusen and Geographic Atrophy Area Size after Cataract Surgery Using the MD3RI Tool for Computer-Aided Contour Drawing

  Brunner, S., Mora, A. T. B. D. & Fonseca, J. M. M. R. D., 1 Jan 2012, In: Ophthalmologica. Journal international d'ophtalmologie. International journal of ophthalmology. Zeitschrift fur Augenheilkunde. 229, 2, p. 86-93

  Research output: Contribution to journal › Article › peer-review

  Open Access
  7 Citations (Scopus)

• Ontology: a support structure for a v-labs network, the Euronet-lab

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, Proceedings of the 9th International Conference on Remote Engineering and Virtual Instrumentation (REV 2012). p. 1-7

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Ontology: A Support Structure for a V-Labs Network: Euronet-Lab

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, In: International Journal Of Online Engineering. 8, S3, p. 26-35

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Citation (Scopus)

• Search for jet stream

  Fonseca, J. M. M. R. D., Ribeiro, M. R. S. D. A. & DEE Group Author, 1 Jan 2012, Proceedings of the 21st National Solar Physics Meeting. p. 1

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Segmentation and tracking of Escherichia coli expressing tsr-venus proteins from combined DIC/Fluorescence images

  Fonseca, J. M. M. R. D., Mora, A. T. B. D. & DEE Group Author, 1 Jan 2012

  Research output: Other contribution

• SMARTIC - EXPLORING SMART-1 IMAGES

  Fonseca, J. M. M. R. D., Mora, A. T. B. D. & DEE Group Author, 1 Jan 2012

  Research output: Other contribution

• Stochastic model of transcription initiation of closely spaced promoters in Escherichia coli

  Fonseca, J. M. M. R. D. & DEE Group Author, 1 Jan 2012, Proceedings of the 9th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics (CIBB 2012). p. 1

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• The use of an Ontology as support of a Virtual Lab and Remote Labs Network Euronet - Lab

  Fonseca, J. M. M. R. D., 1 Jan 2012, International Conference on Interactive Collaborative Learning. p. 1-1

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

• Towards an automatic sunspot tracking: Swarm intelligence and snake model hybrid

  Fonseca, J. M. M. R. D., Ribeiro, M. R. S. D. A. & DEE Group Author, 1 Jan 2012, In: Acta Futura. 5, NA, p. 153-161

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Uma proposta de segmentacão de imagens de bactérias Eschirichia Coli obtidas por microscopia de fluorescência

  Fonseca, J. M. M. R. D., Mora, A. T. B. D. & DEE Group Author, 1 Jan 2012

  Research output: Other contribution

• Variability and Repeatability Tests of ARMD Assessment Using the AD3RI Tool

  Fonseca, J. M. M. R. D., Mora, A. T. B. D. & DEE Group Author, 1 Jan 2012, IFIP Advances in Information and Communication Technology. Camarinha-Matos, L. M., Shahamatnia, E. & Nunes, G. (eds.). Boston: Springer, Vol. 372. p. 583-590

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  Open Access
  1 Citation (Scopus)