Research Output per year
Research Output at NOVA
2020
Molecular epidemiology of HIV-1 infected migrants followed up in portugal: trends between 2001–2017
Pimentel, V., Pingarilho, M., Alves, D., Diogo, I., Fernandes, S., Miranda, M., Pineda-Peña, AC., Libin, P., Martins, MR., Vandamme, AM., Camacho, R. J., Gomes, P. & Abecasis, AB., Feb 2020, In : VIRUSES-BASEL. Vol. 12, n.º 3, p. 268-283 15 p., 268.Research output: Contribution to journal › Article
Open Access
2019
Drivers of HIV-1 transmission: the portuguese case
Pineda-Peña, AC., Pingarilho, M., Li, G., Vrancken, B., Pieter J.K., L., Gomes, P., Camacho, R. J., Theys, K., Abecasis, AB. & Resistance Study Group, P. H., 30 Sep 2019, In : PlosOne. Vol. 14, n.º 9, p. e0218226-e0218240 14 p., e0218226.Research output: Contribution to journal › Article
Open Access
1
Citation
(Scopus)
Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology
Tetyana I., V., Louis, D. P., Pineda-Peña, AC., Denise, K., Lemey, P., Vandamme, AM., Gomes, P., Camacho, R. J., Oliver George, P., Abecasis, AB. & Faria, N. R., 19 Jun 2019, In : Journal of Infectious Diseases. Vol. 220, n.º 2, p. 233-243 10 p., jiz085.Research output: Contribution to journal › Article
4
Citations
(Scopus)
2018
HIV-1 Infection in Cyprus, the Eastern Mediterranean European Frontier: A Densely Sampled Transmission Dynamics Analysis from 1986 to 2012
Pineda-Peña, A. C., Theys, K., Stylianou, D. C., Demetriades, I., Puchhammer, E., Vandamme, A. M., Aleksiev, I., Lepej, S. Z., Linka, M., Fonager, J., Liitsola, K., Kaiser, R., Hamouda, O., Paraskevis, D., Coughlan, S., Grossman, Z., Mor, O., Zazzi, M., Griskevicius, A., Lipnickiene, V. & 17 others, , 1 Dec 2018, In : Scientific Reports. 8, 1, 1702.Research output: Contribution to journal › Article
Open Access
6
Citations
(Scopus)
2017
A21 HIV-1 sub-subtype F1 outbreak among MSM in Belgium
Vinken, L., Fransen, K., Pineda-Peña, A. C., Alexiev, I., Balotta, C., Debaisieux, L., Devaux, C., García Ribas, S., Gomes, P., Incardona, F., Kaiser, R., Ruelle, J., Sayan, M., Paraschiv, S., Paredes, R., Peeters, M., Sonnerborg, A., Vancutsem, E., Van den Wijngaert, S., Van Ranst, M. & 4 others, , Mar 2017, In : Virus evolution. 3, Suppl 1Research output: Contribution to journal › Article
Open Access
File
Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users
Paraschiv, S., Banica, L., Nicolae, I., Niculescu, I., Abagiu, A., Jipa, R., Pineda-Peña, A. C., Pingarilho, M., Neaga, E., Theys, K., Libin, P., Otelea, D. & Abecasis, A., 1 Oct 2017, In : PLoS ONE. 12, 10, e0185866.Research output: Contribution to journal › Article
Open Access
File
5
Citations
(Scopus)
8
Downloads
(Pure)
Implications of hepatitis C virus subtype 1a migration patterns for virus genetic sequencing policies in Italy
Cuypers, L., Vrancken, B., Fabeni, L., Marascio, N., Cento, V., Di Maio, V. C., Aragri, M., Pineda-Peña, A. C., Schrooten, Y., Van Laethem, K., Balog, D., Focà, A., Torti, C., Nevens, F., Perno, C. F., Vandamme, A. M. & Ceccherini-Silberstein, F., 7 Mar 2017, In : BMC Evolutionary Biology. Vol. 17, n.º 1, p. p. 70-80 10 p., 70.Research output: Contribution to journal › Article
Open Access
File
10
Citations
(Scopus)
9
Downloads
(Pure)
2016
On the contribution of Angola to the initial spread of HIV-1
Pineda-Peña, A-C., Ferreira, J. V., Sousa, J. D., Theys, K., Bártolo, I., Leitner, T., Taveira, N., Vandamme, A-M. & Abecasis, A. B., Dec 2016, In : Infection Genetics And Evolution. 46, p. 219-222 4 p.Research output: Contribution to journal › Article
5
Citations
(Scopus)
Sub-Epidemics Explain Localized High Prevalence of Reduced Susceptibility to Rilpivirine in Treatment-Naive HIV-1-Infected Patients: Subtype and Geographic Compartmentalization of Baseline Resistance Mutations
Theys, K., van Laethem, K., Gomes, P., Baele, G., Pineda-Peña, A-C., Vandamme, A-M., Camacho, R. J. & Abecasis, A. B., May 2016, In : AIDS Research and Human Retroviruses. 32, 5, p. 427-33 7 p.Research output: Contribution to journal › Article
12
Citations
(Scopus)
2015
A new ensemble coevolution system for detecting HIV-1 protein coevolution
Li, G., Theys, K., Verheyen, J., Pineda-Peña, A. C., Khouri, R., Piampongsant, S., Eusébio, M., Ramon, J. & Vandamme, A. M., 7 Jan 2015, In : Biology Direct. 10, 1, 1.Research output: Contribution to journal › Article
Open Access
File
7
Citations
(Scopus)
1
Downloads
(Pure)
An integrated map of HIV genome-wide variation from a population perspective
Li, G., Piampongsant, S., Faria, R. N., Voet, A., Pineda-Peña, A. C., Khouri, R., Lemey, P., Vandamme, A. M. & Theys, K., 15 Feb 2015, In : Retrovirology. 12, 1, 18.Research output: Contribution to journal › Article
Open Access
File
52
Citations
(Scopus)
2
Downloads
(Pure)
Epidemiological history and genomic characterization of non-D1 HBV strains identified in Iran
Pineda-Peña, A. C., Faria, N. R., Mina, T., Amini-Bavil-Olyaee, S., Alavian, S. M., Lemey, P., Maes, P., Van Ranst, M. & Pourkarim, M. R., 1 Feb 2015, In : Journal Of Clinical Virology. 63, p. 38-41 4 p.Research output: Contribution to journal › Article
4
Citations
(Scopus)
2014
Trends and predictors of transmitted drug resistance (TDR) and clusters with TDR in a local Belgian HIV-1 epidemic
Pineda-Peña, A. C., Schrooten, Y., Vinken, L., Ferreira, F., Li, G., Trovão, N. S., Khouri, R., Derdelinckx, I., De Munter, P., Kuc̈herer, C., Kostrikis, L. G., Nielsen, C., Littsola, K., Wensing, A., Stanojevic, M., Paredes, R., Balotta, C., Albert, J., Boucher, C., Gomez-Lopez, A. & 5 others, , 8 Jul 2014, In : PlosOne. 9, 7, e101738.Research output: Contribution to journal › Article
28
Citations
(Scopus)